BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4036

Title: Sequential 1H, 13C, and 15N, NMR Assignments and Solution Conformation of Apokedarcidin

Authors: Constantine, Keith; Colson, Kimberly; Wittekind, Michael; Friedrichs, Mark; Zein, Nada; Tuttle, Jeffrey; Langley, David; Leet, John; Schroeder, Daniel; Lam, Kin; Farmer, Bennet; Metzler, William; Bruccoleri, Robert; Mueller, Luciano

Citation: Constantine, Keith; Colson, Kimberly; Wittekind, Michael; Friedrichs, Mark; Zein, Nada; Tuttle, Jeffrey; Langley, David; Leet, John; Schroeder, Daniel; Lam, Kin; Farmer, Bennet; Metzler, William; Bruccoleri, Robert; Mueller, Luciano. "Sequential 1H, 13C, and 15N, NMR Assignments and Solution Conformation of Apokedarcidin"  Biochemistry 33, 11438-11452 (1994).

Assembly members:
Apokedarcidin, polymer, 114 residues, 12400 Da.

Natural source:   Common Name: actinomycete   Taxonomy ID: 44103   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Streptoalloteichus Streptoalloteichus sp.

Experimental source:   Production method: purified from the natural source

Entity Sequences (FASTA):
Apokedarcidin: ASAAVSVSPATGLADGATVT VSASGFATSTSATALQCAIL ADGRGACNVAEFHDFSLSGG EGTTSVVVRRSFTGYVMPDG PEVGAVDCDTAPGGCEIVVG GNTGEYGNAAISFG

Data sets:
Data typeCount
13C chemical shifts320
15N chemical shifts116
1H chemical shifts671

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Apokedarcidin1

Entities:

Entity 1, Apokedarcidin 114 residues - 12400 Da.

1   ALASERALAALAVALSERVALSERPROALA
2   THRGLYLEUALAASPGLYALATHRVALTHR
3   VALSERALASERGLYPHEALATHRSERTHR
4   SERALATHRALALEUGLNCYSALAILELEU
5   ALAASPGLYARGGLYALACYSASNVALALA
6   GLUPHEHISASPPHESERLEUSERGLYGLY
7   GLUGLYTHRTHRSERVALVALVALARGARG
8   SERPHETHRGLYTYRVALMETPROASPGLY
9   PROGLUVALGLYALAVALASPCYSASPTHR
10   ALAPROGLYGLYCYSGLUILEVALVALGLY
11   GLYASNTHRGLYGLUTYRGLYASNALAALA
12   ILESERPHEGLY

Samples:

sample_one: Apokedarcidin 2.6 mM; H2O 90%; D2O 10%; deuterated sodium acetate 36 mM

sample_conditions_one: pH: 5.4; temperature: 293 K

Experiments:

NameSampleSample stateSample conditions

Software:

No software information available

NMR spectrometers:

  • unknown unknown 0 MHz

Related Database Links:

PDB
GB AAB23716 ADG01894 AFV52188
PIR A55872
SP P41249