BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

Viral Diseases

Disease Genus and Species Protein BMRB entry
Chickenpox/Shingles Varicella Zoster virus MED25 comprising the ACID domain* 17323
Crimean Congo Hemorrhagic Fever Nairovirus CCHFV Gn Zinc finger 17383
Cytomegalovirus Cytomegalovirus Human Cytomegalovirus BAX and cytomegalovirus protein vMIA* 18340
Terminal domain of pUL89 15522 15522
Dengue Fever Flavivirus Dengue virus NS2B-NS3p 18266
TMS2 domain of NS4A protein 17043
Ebola Ebolavirus Zaire ebolavirus Complete internal fusion loop from GP2 17638 17639
Ebola fusion peptide 11004
Second CARD of RIG-I 18622 18623
Human NEDD4 3RD WW domain complex with Ebola Zaire virus matrix protein VP40 derived peptide ILPTAPPEYMEA 16575
Hepatitis A Hepatovirus Hepatitis A virus 3C protease 4836 16837
Hepatitis B Orthohepadnavirus Hepatitis B virus Human HBV core protein 15969
Hepatitis C Hepacivirus Hepatitis C virus Capsid protein 4669
Core-E1 signal peptide 16601
Core+1/S polypeptide 16487
Domain 2 of the non-structural 5A protein 16165
Domain 3 of the non-structural 5A protein 16166 16798 16799 16800
Envelope glycoprotein E2 17011
Glycoproteins E1 4699
Human La protein* 17878
Internal ribosome entry site domain IIId 15697
KKGF 17891
N-terminal domain of non-structural protein 4A 20123
Non-structural protein 2 16886 16892
Non-structrual protein 2 serine protease 4617
Non-structural protein 3 RNA helicase 4791 4885
Non-structural protein 4B 16122 18568
Non-structural protein 5A 5978 15225 17468 26549
p7 polypeptide 6087 18863 25178 25181
Tetraspanin CD81* 18280
Transmembrane proximal region of E1 glycoprotein* 16477
Herpes simplex Simplexvirus Herpes Simplex virus 1 Fusion peptide 15647 15648 15649
gH Fusion peptide 16699 16700
Glycoprotein D-1 26
Glycoprotein H 18335
HVS ORF57 16698
ICP27 16696
ICP47 4557
REF2-I/ICP27 complex* 16683
RRM domain of REF2-I* 16697
Human immunodeficiency virus Lentivirus human immunodeficiency virus C-terminal zinc knuckle 17228
C-terminal zinc knuckle with DNA 17229
Fusion peptide 16595
gp120 and HIV 1885 1886 1887
Prostatic acid phosphatase* 18287
REV-HIV 20093
TAR-RNA binding protein* 18324
Triparite motif protein* 18097
Human immunodeficiency virus 1 Lentivirus human immunodeficiency virus 1 BST-2* 17985
C-terminal domain of VPR 4257
C-terminal half of VPR* 4192
Capsid protein* 4220
CCR5-peptide/HIV-1 gp120/CD4-mimic peptide complex* 17395
Dimeric C-terminal domain of capsid protein 16555
gp120 1885 1886 1887 4322
gp41 clade C MPER peptide 19513
gp41-M-MAT membrane associated MPER trimer 18237
Hck kinase* 17740
Hck32L/Nef 17819
HIV-1 protease* 18138 26511
Inactive protease Bmut5 17994
Inactive protease CRF01_AE 17964
Inactive protease subtype C 17996
Integrase core domain 16695
Integrase Zn finger domain mutant 10015
Monomeric mutant of the HIV-1 capsid protein 17738
Mutant C-terminal domain of capsid/stapled peptide inhibitor complex 17307
N-terminal Vpr peptides 17003
Nef 17922
Nef anchor domain 4950 4951
Nucleic acid binding protein 1640
p55F1 zinc fingerlike domain 252
P75/LEDGF PWWP domain* 18478
PPBS/NCp(12-55) exchange 17216
Protease-substrate complex 16416
RNase H domain 4097
RNase H domain of reverse transcriptase 4093
V3 loop peptide of envelope protein gp120 4298 4322
Vpr 16461
Zinc binding domain from nucleocapsid protein 1656 2217
Human immunodeficiency virus 2 Lentivirus human immunodeficiency virus 2 Myristoylated matrix protein 16888
myrMA bound to di-C4-P1P2 16889
Unmyristoylated matrix protein 16887
Human papillomavirus Human papillomavirus E2 protein 4035
Alphapapillomavirus HPV 26 E6-binding zinc finger 6064
Alphapapillomavirus HPV 26 hDig/E6 complex* 17942
Alphapapillomavirus HPV 16 HPV16 E6 17967 17968
Influenza Influenza virus A AM2-BM2 chimeric channel 17928 17929
Fusion peptide 16597
G8A mutant of hemagglutinin 18617
Hemagglutinin fusion peptide H1 16907
Hemagglutinin fusion peptide mutant G13A 17240
Influenza A virus protein PB1-F2 7258 7289 7290
M2 transmembrane peptide 16020 16612
NS1 4317
Influenza virus B NS1 RNA binding site 25463
Human T-cell Lymphotropic Virus Type 1 human NEDD4 3RD WW domain complex with the HTLV-1 GAG-PRO poliprotein derived peptide SDPQIPPPYVEP 16574
Measles Morbillivirus Measles Virus XD domain 16000
Polio Enterovirus C Genome linked protein VPg* 6898
Poliovirus 3A protein 5753
PV1-VPgpU 20110
Rabies Lyssavirus Rabies virus MAST2/PDZ-C-terminus* 16967
Severe Acute Respiratory Syndrome Betacoronavirus SARS coronavirus C-terminal domain of Nucleocapsid protein 15111 17217
Domain 513-651 from NSP3 15469
Domain-C from NSP3 16008
HR2 domain 6969
Main protease 17251
N-terminal domain of Nucleocapsid protein 6372
Nonstructural protein 1 7014
Nonstructural protein 3 15618 15723
Nonstructural protein 7 6513 16981
Nonstructural protein 9 6501
ORF 7a coded X4 protein 6824
Protease 17911
Unique domain SUD 16613
Viral Gastroenteritis Norovirus norwalk virus Protease 17253
West Nile virus Flavivirus West Nile virus Domain III of the envelope protein 6046
NS2B-NS3 protease 11053
West Nile protease 16359
Yellow Fever virus Flavivirus Yellow fever virus Domain III of the envelope protein 15034

* Denotes human/other natural source


Disease Genus and Species Nucleic Acid BMRB entry
Hepatitis B Orthohepadnavirus Hepatitis B virus Stem-loop alpha of HBV 15745
UGGU tetraloop of HBV 15157
Herpes Simplex Simplexvirus Herpes simplex virus GCGAAGC hairpin 5882
Human immunodeficiency virus Lentivirus human immunodeficiency virus C-terminal zinc knuckle with DNA 17229
Human immunodeficiency virus 1 Lentivirus human immunodeficiency virus 1 Exon splicing silencer 3 17671
HIV TAR RNA 17408
HIV TAR RNA and RNA aptamer 11014
HIV TAR RNA and peptide mimic of Tat protein 16941
HIV-1 frameshift site RNA 17436
SL3 hairpin from packaging signal 4175
TAR RNA bulge and Tat protein complex 16877
Human immunodeficiency virus 2 Lentivirus human immunodeficiency virus 2 Complex of TAR RNA and tripeptide 16431
Influenza Influenza virus A Influenza A virus C4 promoter 5553
Influenza A virus cRNA promoter 5528
Influenza A virus promoter RNA 4816 18633
Severe Acute Respiratory Syndrome Betacoronavirus SARS coronavirus Coronaviral stem-loop 2 17309

Associated Human Genes

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