BMRB Entry 10166

Title:
Solution structure of the C2H2 type zinc finger (region 637-667) of human Zinc finger protein 268
Deposition date:
2007-12-28
Original release date:
2009-02-23
Authors:
Tomizawa, T.; Tochio, N.; Abe, H.; Saito, K.; Li, H.; Sato, M.; Koshiba, S.; Kobayashi, N.; Kigawa, T.; Yokoyama, S.
Citation:

Citation: Tochio, N.; Tomizawa, T.; Abe, H.; Saito, K.; Li, H.; Sato, M.; Koshiba, S.; Kobayashi, N.; Kigawa, T.; Yokoyama, S.. "Solution structure of the C2H2 type zinc finger (region 637-667) of human Zinc finger protein 268"  .

Assembly members:

Assembly members:
zf-C2H2 domain, polymer, 44 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: cell free synthesis   Vector: P061218-14

Entity Sequences (FASTA):

Entity Sequences (FASTA):
zf-C2H2 domain: GSSGSSGEKPYSCNECGKAF TFKSQLIVHKGVHTGVKPSG PSSG

Data sets:
Data typeCount
13C chemical shifts154
15N chemical shifts32
1H chemical shifts233

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Zinc finger protein 2681
2ZINC ION2

Entities:

Entity 1, Zinc finger protein 268 44 residues - Formula weight is not available

1   GLYSERSERGLYSERSERGLYGLULYSPRO
2   TYRSERCYSASNGLUCYSGLYLYSALAPHE
3   THRPHELYSSERGLNLEUILEVALHISLYS
4   GLYVALHISTHRGLYVALLYSPROSERGLY
5   PROSERSERGLY

Entity 2, ZINC ION - Zn - 65.409 Da.

Samples:

sample_1: Zinc finger protein 268, [U-13C; U-15N], 1.0 ± 0.1 mM; d-Tris-HCl 20 mM; NaCl 100 mM; ZnCl2 0.05 mM; IDA 1 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 296 K

Experiments:

NameSampleSample stateSample conditions
3D 13C-separated NOESYsample_1not availablecondition_1
3D 15N-separated NOESYsample_1not availablecondition_1

Software:

TOPSPIN v1.3, Bruker - collection

NMRPipe v20030801, Delaglio, F - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.9820, Kobayashi, N. - data analysis

CYANA v2.0.17, Guentert, P. - refinement, structure solution

NMR spectrometers:

  • Bruker AVANCE II 900 MHz

Related Database Links:

PDB

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks