BMRB Entry 19204

Name: Backbone 1H, 13C, and 15N Chemical Shift Assignments for BAF155 SWIRM
Published: 2013-05-14

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR19204

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H, 13C, and 15N Chemical Shift Assignments for BAF155 SWIRM

Deposition date:

2013-04-30

Original release date:

2013-05-14

Authors:

Moon, Sunjin; Lee, Weontae

Citation:

Citation: Moon, Sunjin; Shin, Joon; Lee, Dongju; Seong, Rho; Lee, Weontae. "(1)H, (15)N, and (13)C resonance assignments and secondary structure of the SWIRM domain of human BAF155, a chromatin remodeling complex component." Mol. Cells 36, 333-339 (2013).
PubMed: 23996527

Assembly members:

Assembly members:
BAF155_SWIRM_domain, polymer, 98 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: purified from the natural source Host organism: Escherichia coli Vector: pMAL-c2X

Entity Sequences (FASTA):

Entity Sequences (FASTA):
BAF155_SWIRM_domain: IIIPSYASWFDYNCIHVIER RALPEFFNGKNKSKTPEIYL AYRNFMIDTYRLNPQEYLTS TACRRNLTGDVCAVMRVHAF LEQWGLVNYQVDPESRPM

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	280
15N chemical shifts	86
1H chemical shifts	608

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	BAF155 SWIRM domain	1

Entities:

Entity 1, BAF155 SWIRM domain 98 residues - Formula weight is not available

1

ILE

PRO

SER

TYR

ALA

SER

TRP

PHE

2

ASP

TYR

ASN

CYS

ILE

HIS

VAL

ILE

GLU

ARG

3

ARG

ALA

LEU

PRO

GLU

PHE

ASN

GLY

LYS

4

ASN

LYS

SER

LYS

THR

PRO

GLU

ILE

TYR

LEU

5

ALA

TYR

ARG

ASN

PHE

MET

ILE

ASP

THR

TYR

6

ARG

LEU

ASN

PRO

GLN

GLU

TYR

LEU

THR

SER

7

THR

ALA

CYS

ARG

ASN

LEU

THR

GLY

ASP

8

VAL

CYS

ALA

VAL

MET

ARG

VAL

HIS

ALA

PHE

9

LEU

GLU

GLN

TRP

GLY

LEU

VAL

ASN

TYR

GLN

10

VAL

ASP

PRO

GLU

SER

ARG

PRO

MET

Samples:

sample_1: BAF155 SWIRM domain, [U-100% 13C; U-100% 15N], 0.5 mM

sample_conditions_1: ionic strength: 0.1 M; pH: 6.8; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1

Software:

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

Bruker DRX 500 MHz

DBJ	BAE25395 BAE25713 BAE25978 BAG63721 BAG63813
GB	AAB42085 AAC50693 AAH21862 AAH32564 AAH39843
REF	NP_001100331 NP_003065 NP_033237 XP_001154676 XP_001366921
SP	P97496 Q92922
TPG	DAA17059
AlphaFold	P97496 Q92922