BMRB Entry 19563

Title:
chemical shift assignments for human dihdyrofolate reductase bound to folate
Deposition date:
2013-10-18
Original release date:
2016-04-04
Authors:
Wright, Peter; Bhabha, Gira; Tuttle, Lisa; Kroon, Gerard
Citation:

Citation: Tuttle, Lisa; Dyson, H. Jane; Wright, Peter. "Side Chain Conformational Averaging in Human Dihydrofolate Reductase"  Biochemistry 53, 1134-1145 (2014).
PubMed: 24498949

Assembly members:

Assembly members:
DHFR, polymer, 187 residues, Formula weight is not available
FOLIC ACID, non-polymer, 441.397 Da.

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET21a

Data sets:
Data typeCount
13C chemical shifts180
15N chemical shifts168
1H chemical shifts168

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1DHFR1
2Folate2

Entities:

Entity 1, DHFR 187 residues - Formula weight is not available

1   METVALGLYSERLEUASNCYSILEVALALA
2   VALSERGLNASNMETGLYILEGLYLYSASN
3   GLYASPLEUPROTRPPROPROLEUARGASN
4   GLUPHEARGTYRPHEGLNARGMETTHRTHR
5   THRSERSERVALGLUGLYLYSGLNASNLEU
6   VALILEMETGLYLYSLYSTHRTRPPHESER
7   ILEPROGLULYSASNARGPROLEULYSGLY
8   ARGILEASNLEUVALLEUSERARGGLULEU
9   LYSGLUPROPROGLNGLYALAHISPHELEU
10   SERARGSERLEUASPASPALALEULYSLEU
11   THRGLUGLNPROGLULEUALAASNLYSVAL
12   ASPMETVALTRPILEVALGLYGLYSERSER
13   VALTYRLYSGLUALAMETASNHISPROGLY
14   HISLEULYSLEUPHEVALTHRARGILEMET
15   GLNASPPHEGLUSERASPTHRPHEPHEPRO
16   GLUILEASPLEUGLULYSTYRLYSLEULEU
17   PROGLUTYRPROGLYVALLEUSERASPVAL
18   GLNGLUGLULYSGLYILELYSTYRLYSPHE
19   GLUVALTYRGLULYSASNASP

Entity 2, Folate - 441.397 Da.

1   FOL

Samples:

sample_1: DHFR, [U-99% 15N], 1000 uM; potassium phosphate 50 mM; potassium chloride 50 mM; EDTA 1 mM; DTT 1 mM; sodium azide 0.02%; H2O 90%; D2O 10%

sample_conditions_1: ionic strength: 50 mM; pH: 6.5; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D HNCAsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1

Software:

NMRView, Johnson, One Moon Scientific - chemical shift assignment

NMR spectrometers:

  • Bruker Avance 750 MHz
  • Bruker DRX 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks