BMRB Entry 34214

Title:
NMR structure of EphA2-Sam stapled peptides (S13STshort)
Deposition date:
2017-12-11
Original release date:
2018-07-26
Authors:
Mercurio, F.; Leone, M.
Citation:

Citation: Mercurio, F.; Pirone, L.; Di Natale, C.; Marasco, D.; Pedone, E.; Leone, M.. "Sam domain-based stapled peptides: Structural analysis and interaction studies with the Sam domains from the EphA2 receptor and the lipid phosphatase Ship2"  Bioorg. Chem. 80, 602-610 (2018).
PubMed: 30036816

Assembly members:

Assembly members:
entity_1, polymer, 15 residues, 1587.998 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: XLPGHXKRIXYSLLX

Data sets:
Data typeCount
1H chemical shifts115

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1entity_11

Entities:

Entity 1, entity_1 15 residues - 1587.998 Da.

1   ACELEUPROGLYHISMK8LYSARGILEMK8
2   TYRSERLEULEUNH2

Samples:

sample_1: S13STshort 400 uM

sample_conditions_1: pH: 7.4; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D DQF-COSYsample_1isotropicsample_conditions_1

Software:

VNMRJ, Varian - processing

XEASY, Bartels et al. - chemical shift assignment

CYANA v2.1, Guntert, Mumenthaler and Wuthrich - refinement

Chimera v1.10.1, Pettersen et al. - geometry optimization

NMR spectrometers:

  • Varian INOVA 600 MHz