BMRB Entry 36105

Title:
Solution structure of arenicin-3 derivative N6
Deposition date:
2017-07-17
Original release date:
2017-08-29
Authors:
Liu, X.; Wang, J.
Citation:

Citation: Yang, N.; Liu, X.; Teng, D.; Li, Z.; Wang, X.; Mao, R.; Wang, X.; Hao, Y.; Wang, J.. "Antibacterial and detoxifying activity of NZ17074 analogues with multi-layers of selective antimicrobial actions against Escherichia coli and Salmonella enteritidis"  Sci. Rep. 7, 3392-3392 (2017).
PubMed: 28611436

Assembly members:

Assembly members:
N6, polymer, 21 residues, 2482.871 Da.

Natural source:

Natural source:   Common Name: Arenicola marina   Taxonomy ID: 6344   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Arenicola not available

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
N6: GFAWNVCVYRNGVRVCHRRA N

Data sets:
Data typeCount
13C chemical shifts51
15N chemical shifts23
1H chemical shifts145

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1entity_11

Entities:

Entity 1, entity_1 21 residues - 2482.871 Da.

1   GLYPHEALATRPASNVALCYSVALTYRARG
2   ASNGLYVALARGVALCYSHISARGARGALA
3   ASN

Samples:

sample_1: N6 2.0 mM; H2O 90%; D2O, [U-2H], 10%

sample_conditions_1: ionic strength: 0 mM; pH: 4; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
2D 1H-13C HSQCsample_1isotropicsample_conditions_1

Software:

ARIA, Linge, O'Donoghue and Nilges - structure calculation

CNS, Brunger, Adams, Clore, Gros, Nilges and Read - refinement

CcpNMR, CCPN - chemical shift assignment

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMR spectrometers:

  • Agilent DD2 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks