BMRB Entry 6412

Title:
FRAGMENT 33-61 OF BOVINE alpha-HEMOGLBIN: THE EFFECT OF C-TERMINAL AMIDATION AND IDENTIFICATION OF THE MINIMAL PORTION WITH ANTIFUNGAL ACTIVITY
Deposition date:
2004-12-06
Original release date:
2005-10-20
Authors:
Machado, Alessandra; Sforca, Mauricio; Miranda, Antonio; Daffre, Sirlei; Spisni, Alberto; Pertinhez, Thelma; Miranda, M. Teresa
Citation:

Citation: Sforca, Mauricio; Machado, Alessandra; Figueredo, Rita; Oyama, Sergio; Silva, Fernanda; Miranda, Antonio; Daffre, Sirlei; Miranda, M.; Spisni, Alberto; Pertinhez, Thelma. "The micelle-bound structure of an antimicrobial peptide derived from the alpha-chain of bovine hemoglobin isolated from the tick Boophilus microplus."  Biochemistry 44, 6440-6451 (2005).
PubMed: 15850378

Assembly members:

Assembly members:
48-61 fragment, polymer, 14 residues, 1374.5 Da.

Natural source:

Natural source:   Common Name: Cow   Taxonomy ID: 9913   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Bos taurus

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
48-61 fragment: LSHGSAQVKGHGAK

Data sets:
Data typeCount
1H chemical shifts83
coupling constants13

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
148-61 fragment1

Entities:

Entity 1, 48-61 fragment 14 residues - 1374.5 Da.

1   LEUSERHISGLYSERALAGLNVALLYSGLY
2   HISGLYALALYS

Samples:

sample_1: 48-61 fragment 1.0 mM; sodium dodecyl sulfate (SDS) 200 mM

Ex-cond_1: pH: 4.0; temperature: 310 K

Experiments:

NameSampleSample stateSample conditions
1H DQF-COSYnot availablenot availablenot available
NOESYnot availablenot availablenot available
ROESYnot availablenot availablenot available
TOCSYnot availablenot availablenot available

Software:

NMRPIPE v5.0 -

NMRView v5.0 -

NMR spectrometers:

  • Varian Inova 500 MHz

Related Database Links:

SWISS-PROT Q9XSK1 Q9TSN9 Q9TSN8 P01966 P01969
REF XP_875749.1 XP_884752.1 XP_589954.2 XP_884781.1 XP_884719.1
PRF 1814300B 1004268B
PIR B49141 A58794
GenBank AAI02941.1 AAB22948.1
EMBL CAB56827.1 CAB43765.1 CAB43764.1 CAB43763.1 CAB43762.1
PDB
BMRB 6413 6413 6412