BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 18085

Title: Alvinellacin

Authors: Jung, Sascha; Tasiemski, Aurelie; Leippe, Matthias; Groetzinger, Joachim

Citation: Jung, Sascha; Tasiemski, Aurelie; Leippe, Matthias; Hecht, Oliver; Soennichsen, Frank; Groetzinger, Joachim. "Structure of Alvinellacin"  Not known ., .-..

Assembly members:
entity, polymer, 22 residues, 2611.172 Da.

Natural source:   Common Name: Segmented worms   Taxonomy ID: 6376   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Alvinella pompejana

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
entity: RGCYTRCWKVGRNGRVCMRV CT

Data sets:
Data typeCount
1H chemical shifts95

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Alvinellacin1

Entities:

Entity 1, Alvinellacin 22 residues - 2611.172 Da.

1   ARGGLYCYSTYRTHRARGCYSTRPLYSVAL
2   GLYARGASNGLYARGVALCYSMETARGVAL
3   CYSTHR

Samples:

sample_1: Alvinellacin 2 mM; H2O 90%; D2O 10%

sample_conditions_1: pH: 2.8; pressure: 1 atm; temperature: 283 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1

Software:

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMRView, Johnson, One Moon Scientific - data analysis

CYANA, Guntert, Mumenthaler and Wuthrich - structure solution

NMR spectrometers:

  • Bruker Avance 600 MHz

Related Database Links:

PDB
GB AHY21741