BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 4692

Title: SOLUTION STRUCTURE OF A HUMAN TELOMERE FRAGMENT   PubMed: 10860727

Authors: Phan, A.; Gueron, M.; Leroy, J.

Citation: Phan, A.; Gueron, M.; Leroy, J.. "The solution structure and internal motions of a fragment of the cytidine-rich strand of the human telomere"  J. Mol. Biol. 299, 123-144 (2000).

Assembly members:
5'-D(*CP*CP*CP*TP*AP*AP*(5MC)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3', polymer, 22 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
5'-D(*CP*CP*CP*TP*AP*AP*(5MC)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3': XXXTAAXCCTAACCCXAAXX XT

Data typeCount
1H chemical shifts245
31P chemical shifts21

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
15'-D(*CP*CP*CP*TP*AP*AP*(5MC)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3'1

Entities:

Entity 1, 5'-D(*CP*CP*CP*TP*AP*AP*(5MC)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3' 22 residues - Formula weight is not available

1   CHCHCHDTDADA5MCDCDCDT
2   DADADCDCDCDUDADACHCH
3   CHDT

Samples:

sample_1: 5'-D(*CP*CP*CP*TP*AP*AP*(5MC)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3'1.5 – 4 mM

sample_cond_1: pH: 5; temperature: 303 K; ionic strength: 10 mM; pressure: 1 atm

Experiments:

NameSampleSample stateSample conditions
NOESYsample_1not availablesample_cond_1
COSYsample_1not availablesample_cond_1
TOCSYsample_1not availablesample_cond_1
31P-1H hetero-TOCSYsample_1not availablesample_cond_1
13C-1H HSQCsample_1not availablesample_cond_1
HMBCsample_1not availablesample_cond_1
JRHMBCsample_1not availablesample_cond_1

Software:

X-PLOR v3.851 - refinement

NMR spectrometers:

  • Bruker Avance 800 MHz

Related Database Links: