BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4914

Title: Backbone 1H chemical shift assignments for vMIP-II   PubMed: 11165244

Authors: Crump, Matthew; Elisseeva, Elena; Gong, Jiang-Hong; Clark-Lewis, Ian; Sykes, Brian

Citation: Crump, Matthew; Elisseeva, Elena; Gong, Jiang-Hong; Clark-Lewis, Ian; Sykes, Brian. "Structure/Function of Human Herpesvirus-8 MIP-II (1-71) and the Antagonist N-terminal Segment (1-10)"  FEBS Lett. 489, 171-175 (2001).

Assembly members:
vMIP-II, polymer, 71 residues, Formula weight is not available

Natural source:   Common Name: HHV-8 (Kapsoi   Taxonomy ID: not available   Superkingdom: herpesvirus)'   Kingdom: not available   Genus/species: not available Viruses

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
vMIP-II: LGASWHRPDKCCLGYQKRPL PQVLLSSWYPTSQLCSKPGV IFLTKRGRQVCADKSKDWVK KLMQQLPVTAR

Data sets:
  • assigned_chemical_shifts
Data typeCount
1H chemical shifts506

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1vMIP-II subunit 1 monomer1

Entities:

Entity 1, vMIP-II subunit 1 monomer 71 residues - Formula weight is not available

1   LEUGLYALASERTRPHISARGPROASPLYS
2   CYSCYSLEUGLYTYRGLNLYSARGPROLEU
3   PROGLNVALLEULEUSERSERTRPTYRPRO
4   THRSERGLNLEUCYSSERLYSPROGLYVAL
5   ILEPHELEUTHRLYSARGGLYARGGLNVAL
6   CYSALAASPLYSSERLYSASPTRPVALLYS
7   LYSLEUMETGLNGLNLEUPROVALTHRALA
8   ARG

Samples:

Sample_1: vMIP-II mM

cond_1: pH: 5; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
COSYnot availablenot availablenot available
TOCSYnot availablenot availablenot available
NOESYnot availablenot availablenot available

Software:

PIPP - Automated peak assignment with model chemokine structures.

NMR spectrometers:

  • Varian Unity 600 MHz
  • Varian Inova 500 MHz
  • Varian Inova 600 MHz

Related Database Links:

BMRB 4852
PDB
GB AAB61702 AAB62642 AAC34941 AAC57093 ABD28861
REF YP_001129362
SP Q98157