BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 5018

Title: Solution Structure of the Tumor Necrosis Factor Receptor-1 Death Domain   PubMed: 11453696

Authors: Sukits, S.; Lin, L.-L.; Hsu, S.; Malakian, K.; Powers, R.; Xu, G.-Y.

Citation: Sukits, S.; Lin, L.-L.; Hsu, S.; Malakian, K.; Powers, R.; Xu, G.-Y.. "Solution Structure of the Tumor Necrosis Factor Receptor-1 Death Domain"  J. Mol. Biol. 310, 895-906 (2001).

Assembly members:
Tumor Necrosis Factor Receptor-1, polymer, 112 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
Tumor Necrosis Factor Receptor-1: MAHKPQSLDTDDPATLYAVV ENVPPLRWKEFVKRLGLSDH EIDRLELQNGRCLREAQYSM LATWRRRTPRREATLELLGR VLRDMDLLGCLEDIEEALCG PAALPPAPSLLR

Data sets:
Data typeCount
1H chemical shifts573
13C chemical shifts431
15N chemical shifts98

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1TUMOR NECROSIS FACTOR RECEPTOR-11

Entities:

Entity 1, TUMOR NECROSIS FACTOR RECEPTOR-1 112 residues - Formula weight is not available

1   METALAHISLYSPROGLNSERLEUASPTHR
2   ASPASPPROALATHRLEUTYRALAVALVAL
3   GLUASNVALPROPROLEUARGTRPLYSGLU
4   PHEVALLYSARGLEUGLYLEUSERASPHIS
5   GLUILEASPARGLEUGLULEUGLNASNGLY
6   ARGCYSLEUARGGLUALAGLNTYRSERMET
7   LEUALATHRTRPARGARGARGTHRPROARG
8   ARGGLUALATHRLEUGLULEULEUGLYARG
9   VALLEUARGASPMETASPLEULEUGLYCYS
10   LEUGLUASPILEGLUGLUALALEUCYSGLY
11   PROALAALALEUPROPROALAPROSERLEU
12   LEUARG

Samples:

sample_1: Tumor Necrosis Factor Receptor-1 1 mM; sodium acetate 10 mM; DTT 10 mM

sample_cond_1: pH: 4.0; temperature: 308 K; ionic strength: 10 mM; pressure: 1 atm

Experiments:

NameSampleSample stateSample conditions
3D 15N-separated NOESYnot availablenot availablenot available
3D 13C-separated NOESYnot availablenot availablenot available
4D 13C-separated NOESYnot availablenot availablenot available

Software:

X-PLOR v9.8 - structure solution

NMRPipe v1.8 - processing

pipp v4.2.2 - data analysis

NMR spectrometers:

  • Varian UNITYplus 600 MHz

Related Database Links:

PDB
DBJ BAF83777 BAG37891 BAG51763 BAG60879 BAG65321
EMBL CAA39021
GB AAA03210 AAA36753 AAA36754 AAA36756 AAA61201
REF NP_001056 XP_002822854 XP_004052596 XP_007965520 XP_008971992
SP P19438