BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 5265

Title: The solution structure of antibacterial peptide (Moricin) isolated from the silworm, Bombyx mori   PubMed: 11997013

Authors: Hemmi, Hikaru; Ishibashi, Jun; Hara, Seiichi; Yamakawa, Minoru

Citation: Hemmi, Hikaru; Ishibashi, Jun; Hara, Seiichi; Yamakawa, Minoru. "Solution structure of moricin, an antibacterial peptide, isolated from the silkworm Bombyx mori"  FEBS Lett. 518, 33-38 (2002).

Assembly members:
moricin, polymer, 42 residues, Formula weight is not available

Natural source:   Common Name: domestic silkworm   Taxonomy ID: 7091   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Bombyx mori

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
moricin: AKIPIKAIKTVGKAVGKGLR AINIASTANDVFNFLKPKKR KA

Data sets:
Data typeCount
1H chemical shifts325

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1moricin1

Entities:

Entity 1, moricin 42 residues - Formula weight is not available

1   ALALYSILEPROILELYSALAILELYSTHR
2   VALGLYLYSALAVALGLYLYSGLYLEUARG
3   ALAILEASNILEALASERTHRALAASNASP
4   VALPHEASNPHELEULYSPROLYSLYSARG
5   LYSALA

Samples:

sample_1: moricin mM; CD3OH 100%

sample_2: moricin mM; CD3OD 100%

Ex-cond_1: pH: .; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
1H-1H TOCSYnot availablenot availablenot available
1H-1H DQF-COSYnot availablenot availablenot available
1H-1H NOESYnot availablenot availablenot available
1H-1H E.COSYnot availablenot availablenot available
1H-1H ROESYnot availablenot availablenot available

Software:

xwinnmr v2.6 - acquisition and processing

FELIX v2000 - processing

SPARKY v3.1 - peak assignment

NMR spectrometers:

  • Bruker Avance 800 MHz
  • Bruker Avance 500 MHz

Related Database Links:

PDB
DBJ BAA34260 BAA77338 BAB13508
GB AAB35810 AAW21268 AAW21269 ABF69030
REF NP_001036829
SP O96059 P82818