BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5283

Title: Proton Chemical Shift Assignments for Vpr(34-51) Peptide   PubMed: 12084067

Authors: Engler, Andrea; Stangler, Thomas; Willbold, Dieter

Citation: Engler, Andrea; Stangler, Thomas; Willbold, Dieter. "Structure of Human Immunodeficiency Virus Type 1 Vpr(34-51) Peptide in Micelle containing Aqueous Solution"  Eur. J. Biochem. 269, 3264-3269 (2002).

Assembly members:
Vpr(34-51), polymer, 20 residues, Formula weight is not available

Natural source:   Common Name: HIV-1   Taxonomy ID: 11676   Superkingdom: Viruses   Kingdom: not available   Genus/species: Lentivirus Human immunodeficiency virus type 1

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
Vpr(34-51): XFPRIWLHNLGQHIYETYGX

Data typeCount
1H chemical shifts416

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Vpr(34-51)1

Entities:

Entity 1, Vpr(34-51) 20 residues - Formula weight is not available

1   ACEPHEPROARGILETRPLEUHISASNLEU
2   GLYGLNHISILETYRGLUTHRTYRGLYNH2

Samples:

sample_dpc: Vpr(34-51) 2.0 mM; DPC-d38 100 mM; D2O 10 % (v/v); H2O 90 % (v/v)

sample_tfe: Vpr(34-51) 2 mM; Trifluoroethanol-d2 50 % (v/v); H2O 50 % (v/v)

sample_meohcf: Vpr(34-51) 2 mM; Methanol-d2 50 % (v/v); Chloroform-d 50 % (v/v)

condition_dpc: ionic strength: 100 mM; pH: 4.5; temperature: 298 K

condition_tfe_meohcf: pH: .; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
DQF-COSYnot availablenot availablenot available
TOCSYnot availablenot availablenot available
NOESYnot availablenot availablenot available

Software:

VNMR v5.3 - data collection

NDee - data analysis

NMR spectrometers:

  • Varian UnityINOVA 600 MHz

Related Database Links:

PDB
DBJ BAA93983.1 BAA93984.1 BAF34644.1
GenBank AAC41100.1 AAQ97545.1 AAQ97554.1 ABF00752.1 ABV28250.1
SWISS-PROT P12520