BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5346

Title: Solution Structure of a Novel Disintegrin, Salmosin from Agkistrondon halys Venom   PubMed: 14661951

Authors: Shin, Joon; Hong, Sung-Yu; Chung, Kwanghoe; Kang, Incheol; Jang, Yangsoo; Kim, Doo-sik; Lee, Weontae

Citation: Shin, Joon; Hong, Sung-Yu; Chung, Kwanghoe; Kang, Incheol; Jang, Yangsoo; Kim, Doo-sik; Lee, Weontae. "Solution Structure of a Novel Disintegrin, Salmosin from Agkistrondon halys Venom"  Biochemistry 42, 14408-14415 (2003).

Assembly members:
salmosin, polymer, 73 residues, Formula weight is not available

Natural source:   Common Name: Korean snake   Taxonomy ID: not available   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Agkistrondon halys

Experimental source:   Production method: purified from the natural source

Entity Sequences (FASTA):
salmosin: EAGEECDCGSPGNPCCDAAT CKLRQGAQCAEGLCCDQCRF MKEGTICRRARGDDLDDYCN GISAGCPRNPFHA

Data sets:
Data typeCount
1H chemical shifts391

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1platelet aggregation inhibitor disintegrin1

Entities:

Entity 1, platelet aggregation inhibitor disintegrin 73 residues - Formula weight is not available

1   GLUALAGLYGLUGLUCYSASPCYSGLYSER
2   PROGLYASNPROCYSCYSASPALAALATHR
3   CYSLYSLEUARGGLNGLYALAGLNCYSALA
4   GLUGLYLEUCYSCYSASPGLNCYSARGPHE
5   METLYSGLUGLYTHRILECYSARGARGALA
6   ARGGLYASPASPLEUASPASPTYRCYSASN
7   GLYILESERALAGLYCYSPROARGASNPRO
8   PHEHISALA

Samples:

sample_1: salmosin 1.0 mM; H2O 90%; D2O 10%

experimental_conditions: pH: 7; temperature: 298 K; ionic strength: 50 mM; pressure: 1 atm

Experiments:

NameSampleSample stateSample conditions
2D NOESYnot availablenot availablenot available
DQF-COSYnot availablenot availablenot available
2D TOCSYnot availablenot availablenot available

Software:

XWINNMR v2.6 - collection, processing

CNS v1.0 - refinement

Sparky v3.1 - data analysis

NMR spectrometers:

  • Bruker DRX 600 MHz
  • Bruker DRX 500 MHz

Related Database Links:

PDB
GB AAC08997 AAD02653 AAK73517
SP O73795 Q90WC0