BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5459

Title: High precision NMR structure of RING-H2 finger domain of EL5, a rice gene in response to N-acetylchitooligosaccahride elicitor   PubMed: 12588869

Authors: Yamazaki, Toshimasa

Citation: Katoh, Shizue; Hong, Cui; Tsunoda, Yuki; Murata, Katsuyoshi; Takai, Ryota; Minami, Eiichi; Yamazaki, Toshimasa; Katoh, Etsuko. "High Precision NMR Structure and Function of the RING-H2 Finger Domain of EL5, a Rice Protein whose Expression is Increased upon Exposure to Pathogen-derived Oligosaccahrides"  J. Biol. Chem. 278, 15341-15348 (2003).

Assembly members:
RING-H2 finger domain, polymer, 55 residues, Formula weight is not available

Natural source:   Common Name: Rice   Taxonomy ID: 4530   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Olyza sativa

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
RING-H2 finger domain: AMDDGVECAVCLAELEDGEE ARFLPRCGHGFHAECVDMWL GSHSTCPLCRLTVVV

Data sets:
Data typeCount
13C chemical shifts233
15N chemical shifts51
1H chemical shifts349

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Ubiquitine-conjugate enzyme binding domain1

Entities:

Entity 1, Ubiquitine-conjugate enzyme binding domain 55 residues - Formula weight is not available

1   ALAMETASPASPGLYVALGLUCYSALAVAL
2   CYSLEUALAGLULEUGLUASPGLYGLUGLU
3   ALAARGPHELEUPROARGCYSGLYHISGLY
4   PHEHISALAGLUCYSVALASPMETTRPLEU
5   GLYSERHISSERTHRCYSPROLEUCYSARG
6   LEUTHRVALVALVAL

Samples:

sample_1: RING-H2 finger domain, [U-13C; U-15N], mM

Ex-cond_1: pH: 7.0; temperature: 308 K

Experiments:

NameSampleSample stateSample conditions
NMR_applied_experimentsample_1not availableEx-cond_1

Software:

No software information available

NMR spectrometers:

  • unknown unknown 0 MHz

Related Database Links:

PDB
DBJ BAA96874 BAD16530 BAD16534 BAD16538 BAD16542
GB EAZ23461
REF NP_001047149
SP Q9LRB7