BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5475

Title: Homology predicted structure and comparison with the secondary structure from NMR data for plastocyanin from the cyanobacterium synechocystis sp. PCC 6803

Authors: Monleon, Daniel; Celda, Bernardo; Donaire, Antonio

Citation: Donaire, Antonio; Monleon, Daniel; Celda, Bernardo. "Homology predicted structure and comparison with the secondary structure from NMR data for plastocyanin from the cyanobacterium synechocystis sp. PCC 6803"  Inorg. Chim. Acta 275-276, 73-89 (1998).

Assembly members:
plastocyanin synechocystis, polymer, 98 residues, Formula weight is not available

Natural source:   Common Name: Synechocystis sp.   Taxonomy ID: 1143   Superkingdom: Archaea   Kingdom: not available   Genus/species: Cyanobacterium synechocystis

Experimental source:   Production method: purified from the natural source

Entity Sequences (FASTA):
plastocyanin synechocystis: ANATVKMGSDSGALVFEPST VTIKAGEEVKWVNNKLSPHN IVFAADGVDADTAAKLSHKG LAFAAGESFTSTFTEPGTYT YYCEPHRGAGMVGKVVVE

Data sets:
Data typeCount
1H chemical shifts556

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1plastocyanin synechocystis1

Entities:

Entity 1, plastocyanin synechocystis 98 residues - Formula weight is not available

1   ALAASNALATHRVALLYSMETGLYSERASP
2   SERGLYALALEUVALPHEGLUPROSERTHR
3   VALTHRILELYSALAGLYGLUGLUVALLYS
4   TRPVALASNASNLYSLEUSERPROHISASN
5   ILEVALPHEALAALAASPGLYVALASPALA
6   ASPTHRALAALALYSLEUSERHISLYSGLY
7   LEUALAPHEALAALAGLYGLUSERPHETHR
8   SERTHRPHETHRGLUPROGLYTHRTYRTHR
9   TYRTYRCYSGLUPROHISARGGLYALAGLY
10   METVALGLYLYSVALVALVALGLU

Samples:

sample_1: plastocyanin synechocystis 4.0 mM

condition_1: pH: 5.4 na; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
DQF-COSYnot availablenot availablenot available
H,H-TOCSYnot availablenot availablenot available
2D-NOESYnot availablenot availablenot available

Software:

GIFA v4 - analysis, processing

NMR spectrometers:

  • Varian Unity 400 MHz
  • Bruker DRX 600 MHz

Related Database Links:

BMRB 5584
PDB
DBJ BAA10227 BAK51011 BAL30009 BAL33178 BAL36347
EMBL CAA38038
GB AGF52520
REF NP_442157 WP_010873453 YP_005384024 YP_005387193 YP_005409900
SP P21697