BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5516

Title: Assignment of the 1H, 13C and 15N resonances of the Coxsackievirus and Adenovirus receptor domain 1   PubMed: 12522304

Authors: Jiang, Shaokai; Caffrey, Michael

Citation: Jiang, Shaokai; Caffrey, Michael. "Letter to the Editor: Assignment of the 1H, 13C and 15N Resonances of the Coxsackievirus and Adenovirus Receptor Domain 1 "  J. Biomol. NMR 24, 365-366 (2002).

Assembly members:
Coxsackievirus and Adenovirus, polymer, 126 residues, 13741 Da.

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
Coxsackievirus and Adenovirus: GSSITTPEEMIEKAKGETAY LPCKFTLSPEDQGPLDIEWL ISPADNQKVDQVIILYSGDK IYDDYYPDLKGRVHFTSNDL KSGDASINVTNLQLSDIGTY QCKVKKAPGVANKKIHLVVL VKPSGA

Data sets:
Data typeCount
1H chemical shifts903
13C chemical shifts560
15N chemical shifts128

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1CAR-d1 monomer1

Entities:

Entity 1, CAR-d1 monomer 126 residues - 13741 Da.

1   GLYSERSERILETHRTHRPROGLUGLUMET
2   ILEGLULYSALALYSGLYGLUTHRALATYR
3   LEUPROCYSLYSPHETHRLEUSERPROGLU
4   ASPGLNGLYPROLEUASPILEGLUTRPLEU
5   ILESERPROALAASPASNGLNLYSVALASP
6   GLNVALILEILELEUTYRSERGLYASPLYS
7   ILETYRASPASPTYRTYRPROASPLEULYS
8   GLYARGVALHISPHETHRSERASNASPLEU
9   LYSSERGLYASPALASERILEASNVALTHR
10   ASNLEUGLNLEUSERASPILEGLYTHRTYR
11   GLNCYSLYSVALLYSLYSALAPROGLYVAL
12   ALAASNLYSLYSILEHISLEUVALVALLEU
13   VALLYSPROSERGLYALA

Samples:

15N-labled_sample: Coxsackievirus and Adenovirus, [U-95% 15N], 0.8 – 1.2 mM; formate, [U-2H], 50 mM

13C_N15-labeled: Coxsackievirus and Adenovirus, [U-90% 13C; U-90% N15], 0.9 – 1.2 mM; formate, [U-2H], 50 mM

exp_condition_1: pH: 3.0; temperature: 295 K

Experiments:

NameSampleSample stateSample conditions
HNCAnot availablenot availablenot available
HN(CO)CAnot availablenot availablenot available
HNCACBnot availablenot availablenot available
CBCA(CO)NHnot availablenot availablenot available
HNCOnot availablenot availablenot available
H(C)CH-TOCSYnot availablenot availablenot available
(H)CCH-TOCSYnot availablenot availablenot available
CC(CO)NHnot availablenot availablenot available
1H-1H TOCSYnot availablenot availablenot available
1H-1H NOESYnot availablenot availablenot available
1H-15N NOESYnot availablenot availablenot available
1H-15N TOCSYnot availablenot availablenot available
1H-13C NOESYnot availablenot availablenot available

Software:

nmrPipe -

NMR spectrometers:

  • Bruker DRX 600 MHz

Related Database Links:

PDB
DBJ BAG36305
EMBL CAA68868 CAH92396
GB AAC51234 AAD31772 AAF05908 AAF24344 AAG01088
REF NP_001127547 NP_001193992 NP_001193993 NP_001193995 NP_001329
SP P78310 Q5R764