BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 5588

Title: Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2   PubMed: 1245247

Authors: Znosko, B.; Burkard, M.; Krugh, T.; Turner, D.

Citation: Znosko, B.; Burkard, M.; Krugh, T.; Turner, D.. "Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2"  Biochemistry 41, 14978-14987 (2002).

Assembly members:
n.a., polymer, 9 residues, Formula weight is not available

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
n.a.: GGCXXGCCU

Data sets:
Data typeCount
31P chemical shifts8

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
15'-R(*GP*GP*CP*(P5P)P*(P5P)P*GP*CP*CP*U)-3'1

Entities:

Entity 1, 5'-R(*GP*GP*CP*(P5P)P*(P5P)P*GP*CP*CP*U)-3' 9 residues - Formula weight is not available

1   GGCP5PP5PGCCU

Samples:

sample_1: n.a. 1 mM; NaCl 80 mM; phosphate buffer 10 mM; EDTA 0.5 mM; H2O 90%; D2O 10%

sample_2: n.a. 2 mM; NaCl 80 mM; phosphate buffer 10 mM; EDTA 0.5 mM; D2O 99.996%

sample_cond_1: pH: 6.5; pressure: 1 atm; temperature: 273 K

sample_cond_2: pH: 7.7; pressure: 1 atm; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
2D NOESYnot availablenot availablenot available

Software:

VNMR v5.2 - collection

FELIX v2000 - data analysis

DISCOVER v95.0 - structure solution

NMR spectrometers:

  • Varian INOVA 500 MHz

Related Database Links: