BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5907

Title: Assignment of 1H, 13C and 15N Resonances of the Human Ku80 C-terminal Domain   PubMed: 15016365

Authors: Zhang, Ziming; Hu, Weidong; Chen, Yuan

Citation: Zhang, Ziming; Hu, Weidong; Cano, L.; Lee, T.; Chen, D.; Chen, Yuan. "Solution structure of the C-terminal domain of Ku80 suggests important sites for protein-protein interactions."  Structure (Camb) 12, 495-502 (2004).

Assembly members:
Human Ku80 C-terminal Domain, polymer, 152 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
Human Ku80 C-terminal Domain: MHHHHHHKLKTEQGGAHFSV SSLAEGSVTSVGSVNPAENF RVLVKQKKASFEEASNQLIN HIEQFLDTNETPYFMKSIDC IRAFREEAIKFSEEQRFNNF LKALQEKVEIKQLNHFWEIV VQDGITLITKEEASGSSVTA EEAKKFLAPKDK

Data sets:
Data typeCount
13C chemical shifts601
15N chemical shifts155
1H chemical shifts977

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Ku80 CTD1

Entities:

Entity 1, Ku80 CTD 152 residues - Formula weight is not available

1   METHISHISHISHISHISHISLYSLEULYS
2   THRGLUGLNGLYGLYALAHISPHESERVAL
3   SERSERLEUALAGLUGLYSERVALTHRSER
4   VALGLYSERVALASNPROALAGLUASNPHE
5   ARGVALLEUVALLYSGLNLYSLYSALASER
6   PHEGLUGLUALASERASNGLNLEUILEASN
7   HISILEGLUGLNPHELEUASPTHRASNGLU
8   THRPROTYRPHEMETLYSSERILEASPCYS
9   ILEARGALAPHEARGGLUGLUALAILELYS
10   PHESERGLUGLUGLNARGPHEASNASNPHE
11   LEULYSALALEUGLNGLULYSVALGLUILE
12   LYSGLNLEUASNHISPHETRPGLUILEVAL
13   VALGLNASPGLYILETHRLEUILETHRLYS
14   GLUGLUALASERGLYSERSERVALTHRALA
15   GLUGLUALALYSLYSPHELEUALAPROLYS
16   ASPLYS

Samples:

Sample_1: Human Ku80 C-terminal Domain1.0 – 1.5 mM

Experiment_conditions: pH: 6.0; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
HNCOSample_1not availableExperiment_conditions
HN(CA)COSample_1not availableExperiment_conditions
CBCA(CO)NHSample_1not availableExperiment_conditions
HNCACBSample_1not availableExperiment_conditions
C(CO)NHSample_1not availableExperiment_conditions
HC(CO)NHSample_1not availableExperiment_conditions
TOCSYSample_1not availableExperiment_conditions
HCCHTOCSYSample_1not availableExperiment_conditions

Software:

No software information available

NMR spectrometers:

  • unknown unknown 0 MHz

Related Database Links:

BMRB 5912
PDB
DBJ BAD96323 BAE01114 BAF83429 BAH24115
EMBL CAA40736 CAH92321
GB AAA36154 AAA59475 AAH19027 AAH95442 AAR11279
REF NP_001126362 NP_001244295 NP_066964 XP_001151873 XP_003254095
SP P13010