BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5927

Title: NMR Structure of a Cyclic Polyamide-DNA Complex   PubMed: 15212545

Authors: Zhang, Q.; Dwyer, T.; Tsui, V.; Case, D.; Cho, J.; Dervan, P.; Wemmer, D.

Citation: Zhang, Q.; Dwyer, T.; Tsui, V.; Case, D.; Cho, J.; Dervan, P.; Wemmer, D.. "NMR Structure of a Cyclic Polyamide-DNA Complex"  J. Am. Chem. Soc. 126, 7958-7966 (2004).

Assembly members:
TGTTA, polymer, 11 residues, Formula weight is not available
TAACA, polymer, 11 residues, Formula weight is not available
CYE, non-polymer, 948.021 Da.

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
TGTTA: GCCTGTTAGCG
TAACA: CGCTAACAGGC

Data sets:
Data typeCount
1H chemical shifts189

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1strand 11
2strand 22
3Cyclic Polyamide3

Entities:

Entity 1, strand 1 11 residues - Formula weight is not available

1   DGDCDCDTDGDTDTDADGDC
2   DG

Entity 2, strand 2 11 residues - Formula weight is not available

1   DCDGDCDTDADADCDADGDG
2   DC

Entity 3, Cyclic Polyamide - C45 H55 N16 O8 - 948.021 Da.

1   CYE

Samples:

sample_1: TGTTA1 – 2.5 mM; TAACA1 – 2.5 mM; EDTA 0.1 mM; sodium phosphate 10 mM

sample_cond_1: pH: 7.0; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
1H-13C HSQCsample_1not availablesample_cond_1
NOESYsample_1not availablesample_cond_1

Software:

FELIX v2.3 -

NMR spectrometers:

  • Bruker AMX 600 MHz
  • GE . 500 MHz

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