BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 5946

Title: Complete Resonance assignments of a donor-strand complemented AfaD: the afimbrial invasin from Diffusely Adherent E. coli   PubMed: 15213444

Authors: Cota, Ernesto; Anderson, Kirstine; Peter, Simpson; Ho Ann, Chen; Bogdan, Nowicki; Josef, Kur

Citation: Cota, Ernesto; Chen, Ho An; Anderson, Kirstine; Simpson, Peter; du Merle, Laurence; Bernier-Febreau, Christine; Piatek, Rafa; Zalewska, Beata; Nowicki, Bogdan; Kur, Jozef; Le Bouguenec, Chantal; Matthews, Stephen. "Letter to the Editor: Complete resonance assignments of the "donor-strand complemented" AfaD: the afimbrial invasin from Diffusely Adherent E. coli "  J. Biomol. NMR 29, 411-412 (2004).

Assembly members:
afaD-III, polymer, 153 residues, 16601.2 Da.

Natural source:   Common Name: E. coli   Taxonomy ID: 562   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
afaD-III: MRGSHHHHHHGSAELHLESR GGSGTQLRDGAKVATGRIIC REAHTGFHVWMNERQVDGRA ERYVVQSKDGRHELRVRTGG DGWSPVKGEGGKGVSRPGQE EQVFFDVMADGNQDIAPGEY RFSVGGACVVPQEDNKQGFT PSGTTGTTKLTVT

Data sets:
Data typeCount
1H chemical shifts811
13C chemical shifts532
15N chemical shifts133

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1afaD-dsc monomer1

Entities:

Entity 1, afaD-dsc monomer 153 residues - 16601.2 Da.

1   METARGGLYSERHISHISHISHISHISHIS
2   GLYSERALAGLULEUHISLEUGLUSERARG
3   GLYGLYSERGLYTHRGLNLEUARGASPGLY
4   ALALYSVALALATHRGLYARGILEILECYS
5   ARGGLUALAHISTHRGLYPHEHISVALTRP
6   METASNGLUARGGLNVALASPGLYARGALA
7   GLUARGTYRVALVALGLNSERLYSASPGLY
8   ARGHISGLULEUARGVALARGTHRGLYGLY
9   ASPGLYTRPSERPROVALLYSGLYGLUGLY
10   GLYLYSGLYVALSERARGPROGLYGLNGLU
11   GLUGLNVALPHEPHEASPVALMETALAASP
12   GLYASNGLNASPILEALAPROGLYGLUTYR
13   ARGPHESERVALGLYGLYALACYSVALVAL
14   PROGLNGLUASPASNLYSGLNGLYPHETHR
15   PROSERGLYTHRTHRGLYTHRTHRLYSLEU
16   THRVALTHR

Samples:

sample_1: afaD-III 0.8 mM

Ex-cond_1: pH: 7.0; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
not availablesample_1not availableEx-cond_1

Software:

No software information available

NMR spectrometers:

  • . . . MHz

Related Database Links:

PDB
EMBL CAA54118 CAA54119 CAA54120 CAW30800 CAW30817
GB AAG10405 AAG10406 AAG10513 AAK16478 AAK17182
REF WP_001014485 WP_001539577 WP_021545092 WP_021573025 WP_023909623
SP Q47038