BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6040

Title: SP-B C-terminal peptide in SDS micelles   PubMed: 15568810

Authors: Booth, V.; Waring, A.; Walther, F.; Keough, K.

Citation: Booth, V.; Waring, A.; Walther, F.; Keough, K.. "NMR structures of the C-terminal segment of surfactant protein B in detergent micelles and hexafluoro-2-propanol."  Biochemistry 43, 15187-15194 (2004).

Assembly members:
Pulmonary surfactant-associated protein B, polymer, 16 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
Pulmonary surfactant-associated protein B: GRMLPQLVCRLVLRCS

Data sets:
Data typeCount
1H chemical shifts118
15N chemical shifts6

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Pulmonary surfactant-associated protein B1

Entities:

Entity 1, Pulmonary surfactant-associated protein B 16 residues - Formula weight is not available

1   GLYARGMETLEUPROGLNLEUVALCYSARG
2   LEUVALLEUARGCYSSER

Samples:

sample_1: Pulmonary surfactant-associated protein B, [15N]-Leu, Val, 2 mM; sodium dodecyl sulfate, [U-2H], 200 mM; DSS 2 mM; H2O 90%; D2O 10%

sample_cond_1: pH: 6.9; temperature: 298 K; ionic strength: 0 M; pressure: 1 atm

Experiments:

NameSampleSample stateSample conditions
2D TOCSYnot availablenot availablenot available
2D NOESYnot availablenot availablenot available
3D 15N-separated NOESYnot availablenot availablenot available

Software:

NMRPipe v2.2 - processing

NMRView v5.0.4 - data analysis

CNS v1.2 - structure solution, refinement

Ensemble v1 - data analysis

NMR spectrometers:

  • Bruker AVANCE 500 MHz

Related Database Links:

BMRB 18809 6741
PDB
DBJ BAG37452 BAG64767
GB AAA36628 AAA60212 AAA88099 AAB59541 AAH32785
REF NP_000533 NP_942140 XP_003816622 XP_003816624 XP_005264544
SP P07988