BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6137

Title: NMR solution structure of proBnIb of 2S albumin stortage proton from Brassica napus   PubMed: 15609998

Authors: Pantoja, David; Bruix, M.; Rico, M.; Santoro, J.

Citation: Pantoja-Uceda, D.; Palomares, O.; Bruix, M.; Villalba, M.; Rodriguez, R.; Rico, M.; Santoro, J.. "Solution structure and stability against digestion of rproBnIb from rapeseed: relationship to its allergenic properties"  Biochemistry 43, 16036-16045 (2004).

Assembly members:
Brassica napus, polymer, 109 residues, Formula weight is not available

Natural source:   Common Name: Rape   Taxonomy ID: 3708   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Brassica napus

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
Brassica napus: QPQKCQREFQQEQHLRACQQ WIRQQLAGSPFSENQWGPQQ GPSLREQCCNELYQEDQVCV CPTLKQAAKSVRVQGQHGPF QSTRIYQIAKNLPNVCNMKQ IGTCPFIAI

Data sets:
Data typeCount
1H chemical shifts674

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1rproBnIb monomer1

Entities:

Entity 1, rproBnIb monomer 109 residues - Formula weight is not available

1   GLNPROGLNLYSCYSGLNARGGLUPHEGLN
2   GLNGLUGLNHISLEUARGALACYSGLNGLN
3   TRPILEARGGLNGLNLEUALAGLYSERPRO
4   PHESERGLUASNGLNTRPGLYPROGLNGLN
5   GLYPROSERLEUARGGLUGLNCYSCYSASN
6   GLULEUTYRGLNGLUASPGLNVALCYSVAL
7   CYSPROTHRLEULYSGLNALAALALYSSER
8   VALARGVALGLNGLYGLNHISGLYPROPHE
9   GLNSERTHRARGILETYRGLNILEALALYS
10   ASNLEUPROASNVALCYSASNMETLYSGLN
11   ILEGLYTHRCYSPROPHEILEALAILE

Samples:

sample_1: Brassica napus mM

Ex-cond_1: pH: 3.0; temperature: 308 K

Experiments:

NameSampleSample stateSample conditions
COSYsample_1not availableEx-cond_1
TOCSYsample_1not availableEx-cond_1
NOESYsample_1not availableEx-cond_1

Software:

NMRView v5.0.4 - asignment

NMR spectrometers:

  • BRUKER DMX 600 MHz

Related Database Links:

PDB
EMBL CDX92819 CDY46659
GB AAN86249
REF XP_009137643