BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 26055

Title: Solution Structure of BMAP-28(1-18)

Authors: Agadi, Nutan; Kumar, Ashutosh

Citation: Agadi, Nutan; Kumar, Ashutosh. "Structure, Function And Membrane Interaction Studies Of Two Synthetic Antimicrobial Peptides Using Solution And Solid State NMR."  Not known ., .-..

Assembly members:
entity, polymer, 18 residues, 2065.533 Da.

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
entity: GGLRSLGRKILRAWKKYG

Data sets:
Data typeCount
13C chemical shifts34
15N chemical shifts7
1H chemical shifts116

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1entity1

Entities:

Entity 1, entity 18 residues - 2065.533 Da.

1   GLYGLYLEUARGSERLEUGLYARGLYSILE
2   LEUARGALATRPLYSLYSTYRGLY

Samples:

sample_1: sodium phosphate 20 mM; D2O, [U-2H], 10%; H2O 90%; SDS, [U-99% 2H], 50 mM

sample_conditions_1: ionic strength: 0 M; pH: 6.6; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
2D 1H-13C HSQCsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1

Software:

TOPSPIN v3.2, Bruker Biospin - processing

CYANA v3.0, Guntert, Mumenthaler and Wuthrich - structure solution

CNS, Brunger, Adams, Clore, Gros, Nilges and Read - refinement

ccpnmr, CCPN - chemical shift assignment

PSVS, Bhattacharya and Montelione - Validation

NMR spectrometers:

  • Bruker ASCEND 750 MHz
  • Bruker Avance 700 MHz

Related Database Links: