BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4129

Title: 1H and 15N Resonance Assignment of the Calcium-bound Form of the Nereis Diversicolor Sarcoplasmic Calcium(2+)-binding Protein.   PubMed: 9862132

Authors: Craescu, Constantin; Precheur, Benedicte; van Riel, Annick; Sakamoto, Hiroshi; Engelborghs, Yves; Cox, Jos

Citation: Craescu, Constantin; Precheur, Benedicte; van Riel, Annick; Sakamoto, Hiroshi; Engelborghs, Yves; Cox, Jos. "1H and 15N Resonance Assignment of the Calcium-bound Form of the Nereis Diversicolor Sarcoplasmic Calcium(2+)-binding Protein."  J. Biomol. NMR 12, 565-566 (1998).

Assembly members:
calcium-binding protein, polymer, 174 residues, Formula weight is not available
calcium-binding protein, polymer, 174 residues, Formula weight is not available
CA, non-polymer, 40.078 Da.

Natural source:   Common Name: sandworm   Taxonomy ID: 6352   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Neanthes diversicolor

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
calcium-binding protein: XDLWVQKMKTYFNRIDFDKD GAITRMDFESMAERFAKESE MKAEHAKVLMDSLTGVWDNF LTAVAGGKGIDETTFINSMK EMVKNPEAKSVVEGPLPLFF RAVDTNEDNNISRDEYGIFF GMLGLDKTMAPASFDAIDTN NDGLLSLEEFVIAGSDFFMN DGDSTNKVFWGPLV
calcium-binding protein: SDLWVQKMKTYFNRIDFDKD GAITRMDFESMAERFAKESE MKAEHAKVLMDSLTGVWDNF LTAVAGGKGIDETTFINSMK EMVKNPEAKSVVEGPLPLFF RAVDTNEDNNISRDEYGIFF GMLGLDKTMAPASFDAIDTN NDGLLSLEEFVIAGSDFFMN DGDSTNKVFWGPLV

Data typeCount
15N chemical shifts179
1H chemical shifts1031

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1NSCP2
2NSCP acetylated1
3Ca3

Entities:

Entity 2, NSCP 174 residues - Formula weight is not available

1   SERASPLEUTRPVALGLNLYSMETLYSTHR
2   TYRPHEASNARGILEASPPHEASPLYSASP
3   GLYALAILETHRARGMETASPPHEGLUSER
4   METALAGLUARGPHEALALYSGLUSERGLU
5   METLYSALAGLUHISALALYSVALLEUMET
6   ASPSERLEUTHRGLYVALTRPASPASNPHE
7   LEUTHRALAVALALAGLYGLYLYSGLYILE
8   ASPGLUTHRTHRPHEILEASNSERMETLYS
9   GLUMETVALLYSASNPROGLUALALYSSER
10   VALVALGLUGLYPROLEUPROLEUPHEPHE
11   ARGALAVALASPTHRASNGLUASPASNASN
12   ILESERARGASPGLUTYRGLYILEPHEPHE
13   GLYMETLEUGLYLEUASPLYSTHRMETALA
14   PROALASERPHEASPALAILEASPTHRASN
15   ASNASPGLYLEULEUSERLEUGLUGLUPHE
16   VALILEALAGLYSERASPPHEPHEMETASN
17   ASPGLYASPSERTHRASNLYSVALPHETRP
18   GLYPROLEUVAL

Entity 1, NSCP acetylated 174 residues - Formula weight is not available

1   SACASPLEUTRPVALGLNLYSMETLYSTHR
2   TYRPHEASNARGILEASPPHEASPLYSASP
3   GLYALAILETHRARGMETASPPHEGLUSER
4   METALAGLUARGPHEALALYSGLUSERGLU
5   METLYSALAGLUHISALALYSVALLEUMET
6   ASPSERLEUTHRGLYVALTRPASPASNPHE
7   LEUTHRALAVALALAGLYGLYLYSGLYILE
8   ASPGLUTHRTHRPHEILEASNSERMETLYS
9   GLUMETVALLYSASNPROGLUALALYSSER
10   VALVALGLUGLYPROLEUPROLEUPHEPHE
11   ARGALAVALASPTHRASNGLUASPASNASN
12   ILESERARGASPGLUTYRGLYILEPHEPHE
13   GLYMETLEUGLYLEUASPLYSTHRMETALA
14   PROALASERPHEASPALAILEASPTHRASN
15   ASNASPGLYLEULEUSERLEUGLUGLUPHE
16   VALILEALAGLYSERASPPHEPHEMETASN
17   ASPGLYASPSERTHRASNLYSVALPHETRP
18   GLYPROLEUVAL

Entity 3, Ca - Ca - 40.078 Da.

1   CA

Samples:

sample_one: calcium-binding protein, [U-15N], 1.0 mM; H2O 93%; D2O 7%

sample_two: calcium-binding protein 1.2 mM; H2O 93%; D2O 7%

sample_conditions_one: pH: 6.5; temperature: 308 K

Experiments:

NameSampleSample stateSample conditions
not availablenot availablenot availablesample_conditions_one

Software:

No software information available

NMR spectrometers:

  • Varian Unity 500 MHz

Related Database Links:

PDB
SP P04571
SWISS-PROT P04571
BMRB 4129