BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 4186

Title: NMR Solution Structure of Human Cellular Retinoic Acid Binding Protein-Type II

Authors: Wang, L.; Li, Yue; Abildgaard, Frits; Markley, John; Yan, Honggao

Citation: Wang, L.; Li, Yue; Abildgaard, Frits; Markley, John; Yan, Honggao. "NMR Solution Structure of type II Human Cellular Retinoic Acid Binding Protein: Implications for Ligand Binding"  Biochemistry 37, 12727-12736 (1998).

Assembly members:
Cellular Retinoic Acid Binding Protein-Type II, polymer, 137 residues, Formula weight is not available

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eucaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
Cellular Retinoic Acid Binding Protein-Type II: PNFSGNWKIIRSENFEELLK VLGVNVMLRKIAVAAASKPA VEIKQEGDTFYIKTSTTVRT TEINFKVGEEFEEQTVDGRP CKSLVKWESENKMVCEQKLL KGEGPKTSWTRELTNDGELI LTMTADDVVCTRVYVRE

Data sets:
Data typeCount
13C chemical shifts331
15N chemical shifts118
1H chemical shifts820

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1CRABPII1

Entities:

Entity 1, CRABPII 137 residues - Formula weight is not available

1   PROASNPHESERGLYASNTRPLYSILEILE
2   ARGSERGLUASNPHEGLUGLULEULEULYS
3   VALLEUGLYVALASNVALMETLEUARGLYS
4   ILEALAVALALAALAALASERLYSPROALA
5   VALGLUILELYSGLNGLUGLYASPTHRPHE
6   TYRILELYSTHRSERTHRTHRVALARGTHR
7   THRGLUILEASNPHELYSVALGLYGLUGLU
8   PHEGLUGLUGLNTHRVALASPGLYARGPRO
9   CYSLYSSERLEUVALLYSTRPGLUSERGLU
10   ASNLYSMETVALCYSGLUGLNLYSLEULEU
11   LYSGLYGLUGLYPROLYSTHRSERTRPTHR
12   ARGGLULEUTHRASNASPGLYGLULEUILE
13   LEUTHRMETTHRALAASPASPVALVALCYS
14   THRARGVALTYRVALARGGLU

Samples:

sample_one: Cellular Retinoic Acid Binding Protein-Type II1.5 – 2.0 mM

sample_conditions_one: pH: 7.3; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
NOESYsample_onenot availablenot available
TOCSYsample_onenot availablenot available
triple resonance experimentssample_onenot availablenot available

Software:

FELIX v95 - Data processing and peak picking

NMR spectrometers:

  • VARIAN UNITY 500 MHz
  • BRUKER DMX 500 MHz

Related Database Links:

PDB
DBJ BAG34945 BAJ83972
EMBL CAG29353
GB AAA52068 AAA58430 AAH01109 AAV38629 AAV38630
REF NP_001008670 NP_001186652 NP_001253818 NP_001869 XP_001166367
SP P29373 Q5PXY7