BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 4220

Title: HIV-1 capsid protein major homology region peptide analog

Authors: Clish, C.; Peyton, D.; Barklis, E.

Citation: Clish, C.; Peyton, D.; Barklis, E.. "Solution structures of human immunodeficiency virus type 1 (HIV-1) and moloney murine leukemia virus (MoMLV) capsid protein major-homology-region peptide analogs by NMR spectroscopy"  Eur. J. Biochem. 257, 69-77 (1998).

Assembly members:
HIV-1 capsid, polymer, 31 residues, Formula weight is not available

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: not available   Genus/species: Homo sapiens

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
HIV-1 capsid: CSILDIRQGPKEPFRDYVDR FYKTLRAEQAS

Data sets:
Data typeCount
1H chemical shifts178

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1HIV-1 capsid1

Entities:

Entity 1, HIV-1 capsid 31 residues - Formula weight is not available

1   CYSSERILELEUASPILEARGGLNGLYPRO
2   LYSGLUPROPHEARGASPTYRVALASPARG
3   PHETYRLYSTHRLEUARGALAGLUGLNALA
4   SER

Samples:

sample_1: HIV-1 capsid5 – 7 mM; H2O 90%; D2O 10%

sample_cond_1: pH: 3.1; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
NOESYnot availablenot availablenot available
COSYnot availablenot availablenot available
TOCSYnot availablenot availablenot available

Software:

No software information available

NMR spectrometers:

  • Bruker AMX 400 MHz

Related Database Links:

BMRB 15137 16555 17307 17738 19261 19264 19575 25532
PDB
DBJ BAA00992 BAA12988 BAA12996 BAA93773 BAA93774
EMBL CAA11880 CAA11882 CAA11884 CAA11885 CAA11886
GB AAA44201 AAA44224 AAA44306 AAA44313 AAA44324
PIR FOVWLV
PRF 1102247B 1103299C
REF NP_057849 NP_057850 NP_579880
SP P03347 P03348 P03349 P03366 P03367