BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 4392

Title: Binding of AR-1-144, a tri-imidazole DNA minor groove binder, to CCGG sequence analyzed by NMR spectroscopy

Authors: Yang, X.; Kaenzig, C.; Lee, M.; Wang, A.

Citation: Yang, X.; Kaenzig, C.; Lee, M.; Wang, A.. "Binding of AR-1-144, a tri-imidazole DNA minor groove binder, to CCGG sequence analyzed by NMR spectroscop"  Eur. J. Biochem. 263, 646-655 (1999).

Assembly members:
DNA strand, polymer, 10 residues, Formula weight is not available
(2-{[4-({4-[(4-FORMYLAMINO-1-METHYL-1H-IMIDAZOLE-2-CARBONYL)-AMINO]-1-METHYL-1H-IMIDAZOLE-2-CARBONYL}-AMINO)-1-METHYL-1H-IMIDAZOLE-2-CARBONYL]-AMINO}-ETHYL)-DIMETHYL-AMMONIUM, non-polymer, 486.508 Da.

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemically synthesized

Entity Sequences (FASTA):
DNA strand: GAACCGGTTC

Data typeCount
1H chemical shifts104

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA strand A1
2DNA strand B1
3AR-1-1442

Entities:

Entity 1, DNA strand A 10 residues - Formula weight is not available

1   DGDADADCDCDGDGDTDTDC

Entity 2, AR-1-144 - C20 H28 N11 O4 - 486.508 Da.

1   AR1

Samples:

sample_1: DNA minor groove binder 1.25 mM

sample_conditions_set_1: pH: 7.0; temperature: 275 K

Experiments:

NameSampleSample stateSample conditions
NOESYsample_1not availablesample_conditions_set_1
TOCSYsample_1not availablesample_conditions_set_1

Software:

No software information available

NMR spectrometers:

  • VARIAN Unity 750 MHz
  • VARIAN VXR 500 MHz

Related Database Links: