BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4397

Title: Solution Structure of the CX3C Chemokine Domain of Fractalkine

Authors: Handel, T.; Mizoue, L.; Bazan, J.; Johnson, E.

Citation: Mizoue, L.; Bazan, J.; Johnson, E.; Handel, T.. "Solution Structure and Dynamics of the CX3C Chemokine Domain of Fractalkine and Its Interaction with an N-Terminal Fragment of CX3CR1"  Biochemistry 38, 1402-1414 (1999).

Assembly members:
fractalkine, polymer, 77 residues, Formula weight is not available

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
fractalkine: MQHHGVTKCNITCSKMTSKI PVALLIHYQQNQASCGKRAI ILETRQHRLFCADPKEQWVK DAMQHLDRQAAALTRNG

Data sets:
Data typeCount
13C chemical shifts257
15N chemical shifts91
1H chemical shifts514

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1fractalkine1

Entities:

Entity 1, fractalkine 77 residues - Formula weight is not available

1   METGLNHISHISGLYVALTHRLYSCYSASN
2   ILETHRCYSSERLYSMETTHRSERLYSILE
3   PROVALALALEULEUILEHISTYRGLNGLN
4   ASNGLNALASERCYSGLYLYSARGALAILE
5   ILELEUGLUTHRARGGLNHISARGLEUPHE
6   CYSALAASPPROLYSGLUGLNTRPVALLYS
7   ASPALAMETGLNHISLEUASPARGGLNALA
8   ALAALALEUTHRARGASNGLY

Samples:

sample_1: fractalkine, [U-15N; U-13C], 1.6 mM

sample_cond_1: pH: 5.0; pressure: 1 atm; temperature: 295.5 K

Experiments:

NameSampleSample stateSample conditions
3D 15N-edited NOESYnot availablenot availablenot available
3D 13C-edited NOESYnot availablenot availablenot available
4D 13C/13C-edited NOESYnot availablenot availablenot available

Software:

No software information available

NMR spectrometers:

  • Bruker DMX 600 MHz

Related Database Links:

PDB
DBJ BAD92274 BAD96412 BAD97071 BAG36542 BAJ20411
EMBL CAG33707 CAH90903
GB AAB49679 AAB50014 AAC24307 AAH01163 AAH16164
REF NP_001028053 NP_001125514 NP_001292817 NP_002987 XP_003823793
SP P78423