BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4409

Title: DNA DECAMER DUPLEX CONTAINING T-T DEWAR PHOTOPRODUCT   PubMed: 10758155

Authors: Lee, J.; Bae, S.; Choi, B.

Citation: Lee, J.; Bae, S.; Choi, B.. "The Dewar Photoproduct of the Thymidylyl(3' to 5')-thymidine (Dewar Product) Exhibits Mutagenic Behavior in Accordance with the "A rule""  Proc. Natl. Acad. Sci. U. S. A. 97, 4591-4596 (2000).

Assembly members:
DNA (5'-D(*CP*GP*CP*AP*(HYD)TP*+TP*AP*CP*GP*C)- 3'), polymer, 10 residues, Formula weight is not available
DNA (5'-D(*G11P*C12P*G13*T14P*G15P*A16P*T17P*G18P*C19P*G20)-3'), polymer, 10 residues, Formula weight is not available

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: unclassified   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
DNA (5'-D(*CP*GP*CP*AP*(HYD)TP*+TP*AP*CP*GP*C)- 3'): CGCAXXACGC
DNA (5'-D(*G11P*C12P*G13*T14P*G15P*A16P*T17P*G18P*C19P*G20)-3'): GCGTGATGCG

Data sets:
Data typeCount
1H chemical shifts163

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA-DECAMER strand-11
2DNA-DECAMER strand-22

Entities:

Entity 1, DNA-DECAMER strand-1 10 residues - Formula weight is not available

1   DCDGDCDA64TTA3DADCDGDC

Entity 2, DNA-DECAMER strand-2 10 residues - Formula weight is not available

1   DGDCDGDTDGDADTDGDCDG

Samples:

sample_1: DNA (5, -D(*CP*GP*CP*AP*(HYD)TP*+TP*AP*CP*GP*C)-, ; 1, 2, $DECAMER-2 1.0; 4409, 1,

sample_cond_1: pH: 6.6; temperature: 274.0 K

Experiments:

NameSampleSample stateSample conditions
NOESYsample_1not availablesample_cond_1

Software:

XWINNMR -

NMR spectrometers:

  • Bruker DMX 600 MHz

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