BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 4415

Title: Solution-state structure of a DNA dodecamer duplex containing a cis-syn thymine cyclobutane dimer.

Authors: McAteer, K.; Jing, Y.; Kao, J.; Taylor, J.; Kennedy, M.

Citation: McAteer, K.; Jing, Y.; Kao, J.; Taylor, J.; Kennedy, M.. "Solution-state Structure of a DNA Dodecamer Duplex Containing a Cis-Syn Thmine Cyclobutane Dimer, the Major UV photoproduct of DNA"  J. Mol. Biol. 282, 1013-1032 (1998).

Assembly members:
DNA, polymer, 12 residues, Formula weight is not available
DNA, polymer, 12 residues, Formula weight is not available

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: Eukaryota   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemically synthesized

Entity Sequences (FASTA):
DNA: GCACGAATXAAG
DNA: CTTAATTCGTGC

Data sets:
Data typeCount
1H chemical shifts193
31P chemical shifts22

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1strand+1
2strand-2

Entities:

Entity 1, strand+ 12 residues - Formula weight is not available

1   DGDCDADCDGDADADTTTDDA
2   DADG

Entity 2, strand- 12 residues - Formula weight is not available

1   DCDTDTDADADTDTDCDGDT
2   DGDC

Samples:

sample_1: DNA 0.7 mM; DNA 0.7 mM

sample_cond_1: pH*: 6.6; temperature: 278 K

Experiments:

NameSampleSample stateSample conditions
NOESYsample_1not availablesample_cond_1
DQF-COSYsample_1not availablesample_cond_1
HELCOsample_1not availablesample_cond_1
hetero-TOCSYsample_1not availablesample_cond_1

Software:

No software information available

NMR spectrometers:

  • Varian Unity+ 750 MHz
  • Varian Unity+ 500 MHz

Related Database Links: