BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4478

Title: PKD domain 1 from Human polycystein-1

Authors: Bycroft, M.

Citation: Bycroft, M.; Bateman, A.; Clarke, J.; Hamill, S.; Sandford, R.; Thomas, R.; Chothia, C.. "The Structure of a PKD Domain from Polycystin-1: Implications for Polycystic Kidney Diseas"  EMBO J. 18, 297-305 (1999).

Assembly members:
PKD1 HUMAN, polymer, 91 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
PKD1 HUMAN: GSVFPASPGATLVGPHGPLA SGQLAAFHIAAPLPVTATRW DFGDGSAEVDAAGPAASHRY VLPGRYHVTAVLALGAGSAL LGTDVQVEAAP

Data sets:
Data typeCount
1H chemical shifts520
13C chemical shifts176
15N chemical shifts80

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1PKD1 HUMAN1

Entities:

Entity 1, PKD1 HUMAN 91 residues - Formula weight is not available

1   GLYSERVALPHEPROALASERPROGLYALA
2   THRLEUVALGLYPROHISGLYPROLEUALA
3   SERGLYGLNLEUALAALAPHEHISILEALA
4   ALAPROLEUPROVALTHRALATHRARGTRP
5   ASPPHEGLYASPGLYSERALAGLUVALASP
6   ALAALAGLYPROALAALASERHISARGTYR
7   VALLEUPROGLYARGTYRHISVALTHRALA
8   VALLEUALALEUGLYALAGLYSERALALEU
9   LEUGLYTHRASPVALGLNVALGLUALAALA
10   PRO

Samples:

sample_1: PKD1 HUMAN, [U-13C; U-15N], 1 – 3 mM; acetate buffer, [U-2H], mM

sample_cond_1: pH: 3.0; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions

Software:

No software information available

NMR spectrometers:

  • Bruker AMX 500 MHz

Related Database Links:

PDB
GB AAB59488
REF XP_003804194 XP_009439072 XP_011521097