BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4488

Title: DNA decamer duplex containing T-T (6-4) photoadduct   PubMed: 10359763

Authors: Lee, J.; Hwang, G.; Choi, B.

Citation: Lee, J.; Hwang, G.; Choi, B.. "Solution structure of a DNA decamer duplex containing the stable 3' T.G base pair of the pyrimidine(6-4)pyrimidone photoproduct [(6-4) adduct]: implications for the highly specific 3' T --> C transition of the (6-4) adduct"  Proc. Natl. Acad. Sci. USA 96, 6632-6636 (1999).

Assembly members:
DNA decamer strand 1, polymer, 10 residues, Formula weight is not available
DNA decamer strand 2, polymer, 10 residues, Formula weight is not available

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
DNA decamer strand 1: CGCAXTACGC
DNA decamer strand 2: GCGTGATGCG

Data sets:
Data typeCount
1H chemical shifts165

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA decamer strand 11
2DNA decamer strand 22

Entities:

Entity 1, DNA decamer strand 1 10 residues - Formula weight is not available

1   DCDGDCDA64TDTDADCDGDC

Entity 2, DNA decamer strand 2 10 residues - Formula weight is not available

1   DGDCDGDTDGDADTDGDCDG

Samples:

sample_1: DNA decamer strand 1 mM; DNA decamer strand 2 mM

sample_cond_1: pH: 6.6; temperature: 274 K

Experiments:

NameSampleSample stateSample conditions
NOESYsample_1not availablesample_cond_1

Software:

No software information available

NMR spectrometers:

  • Bruker DMX 600 MHz

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