BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 4507

Title: Solution Structure of Carnobacteriocin B2 and Implications for Structure- Activity Relationships Among Type IIa Bacteriocins from Lactic Acid Bacteria   PubMed: 10572140

Authors: Wang, Y.; Henz, M.; Gallagher, N.; Chai, S.; Yan, L.; Gibbs, A.; Stiles, M.; Wishart, D.; Vederas, J.

Citation: Wang, Y.; Henz, M.; Gallagher, N.; Chai, S.; Yan, L.; Gibbs, A.; Stiles, M.; Wishart, D.; Vederas, J.. "Solution Structure of Carnobacteriocin B2 and Implications for Structure- Activity Relationships Among Type IIa Bacteriocins from Lactic Acid Bacteria"  Biochemistry 38, 15438-15447 (1999).

Assembly members:
Type IIA bacteriocin leucocin A, polymer, 37 residues, Formula weight is not available

Natural source:   Common Name: Leuconostoc gelidum   Taxonomy ID: 1244   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Leuconostoc gelidum

Experimental source:   Production method: recombinant technology   Host organism: Leuconostoc gelidum

Entity Sequences (FASTA):
Type IIA bacteriocin leucocin A: KYYGNGVHCTKSGCSVNWGE AFSAGVHRLANGGNGFW

Data sets:
Data typeCount
1H chemical shifts160

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1BACT-IIA1

Entities:

Entity 1, BACT-IIA 37 residues - Formula weight is not available

1   LYSTYRTYRGLYASNGLYVALHISCYSTHR
2   LYSSERGLYCYSSERVALASNTRPGLYGLU
3   ALAPHESERALAGLYVALHISARGLEUALA
4   ASNGLYGLYASNGLYPHETRP

Samples:

sample_1: Type IIA bacteriocin leucocin A 2 mM; TFE, [U-2H], 90%; H2O 10%

sample_cond_1: pH: 2.8; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D NOESYnot availablenot availablenot available

Software:

X-PLOR v3.85 - structure solution

VNMR v5.1 - processing

NMR spectrometers:

  • VARIAN UNITY 500 MHz

Related Database Links:

PDB
DBJ BAJ10057
GB AAA68003 AAC60488 AFW97372
REF WP_032488695 YP_009074555
SP P34034 Q53446